| 1. | FC Vernier (2012) 1 | 6 | 6 | 0 | 0 | (0) | 38 | : | 11 | +27 | 18 | |
| 2. | Lancy FC (2012) 2 | 4 | 4 | 0 | 0 | (0) | 40 | : | 9 | +31 | 12 | |
| 3. | Team Chênois Champel (2012) 2 | 4 | 4 | 0 | 0 | (0) | 30 | : | 8 | +22 | 12 | |
| 4. | FC City (2012) 2 | 6 | 3 | 2 | 1 | (1) | 56 | : | 26 | +30 | 11 | |
| 5. | US Meinier (2012) 3 | 6 | 3 | 0 | 3 | (0) | 23 | : | 28 | -5 | 9 | |
| 6. | Meyrin FC (2012) 2 | 4 | 2 | 0 | 2 | (0) | 29 | : | 14 | +15 | 6 | |
| 7. | FC Grand-Saconnex (2012) 2 | 3 | 1 | 1 | 1 | (0) | 15 | : | 10 | +5 | 4 | |
| 8. | CS Italien GE (2012) 2 | 3 | 1 | 1 | 1 | (0) | 13 | : | 12 | +1 | 4 | |
| 9. | Servette FC (2013) E-11 1 | 3 | 1 | 1 | 1 | (0) | 13 | : | 16 | -3 | 4 | |
| 10. | CS Interstar (2012) 4 | 4 | 1 | 1 | 2 | (25) | 16 | : | 12 | +4 | 4 | |
| 11. | Compesières FC (2012) 2 | 4 | 1 | 0 | 3 | (0) | 9 | : | 27 | -18 | 3 | |
| 12. | FC Perly-Certoux (2012) 2 | 3 | 0 | 1 | 2 | (0) | 3 | : | 15 | -12 | 1 | |
| 13. | Urania Genève Sport (2012) 2 | 4 | 0 | 1 | 3 | (0) | 9 | : | 26 | -17 | 1 | |
| 14. | Etoile Carouge FC (2012) 2 | 2 | 0 | 0 | 2 | (1) | 6 | : | 17 | -11 | 0 | |
| 15. | FC Veyrier Sports (2012) 2 | 3 | 0 | 0 | 3 | (0) | 8 | : | 19 | -11 | 0 | |
| 16. | Olympique de Genève FC (2012) 2 | 3 | 0 | 0 | 3 | (0) | 4 | : | 62 | -58 | 0 |